Public SNP DBs
- These installation packages can be used for new SEQUENCE PILOT installations as well as to update already existing SEQUENCE PILOT installations.
- The Public SNP DBs only can be used for the SEQUENCE PILOT modules SEQNEXT and SEQPATIENT and in case a corresponding genome (hg19 / hg38) is installed.
- The installation packages v2.0 are for SEQUENCE PILOT versions 4.2 and 4.3, while the installation packages v4.0 are for SEQUENCE PILOT versions 4.4 and higher.
- The installation packages v2.0 include the databases: dbSNP, 1000 Genomes, ClinVar, CLINVITAE and COSMIC (for hg38 1000 Genomes is not available).
- The installation packages v4.0 include the databases dbSNP, 1000 Genomes, ClinVar, CLINVITAE, COSMIC, ExAC and gnomAD (for hg38 1000 Genomes, ExAC and gnomAD are not available).
All data available on this website can alternatively be downloaded from our ftp-server. This is recommend especially for the download of big files, because the download can be restarted in case there is an interruption.
- use the following link ftp://ftpsrv.jsi-medisys.de to access out ftp server
- login with user SeqPilotData and password SeqPilot